Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884161.1_cds_XP_016438735.1_34369
CDS Infomation

[gene=LOC107764639] [db_xref=GeneID:107764639] [protein=geraniol 8-hydroxylase-like] [protein_id=XP_016438735.1] [location=complement(join(1375..1980,2658..2942,3208..3804))] [gbkey=CDS]
Sequence

ATGGATTACTATACACTTGTGTTTGGATCAATTTTTGCCTTGAGTTTTCTTTATATTCTA
GCCAAAATACGCAGAAAAGGCACCAAAAAACTTCCACCAGGGCCAAAACCATGGCCAATT
ATAGGAAACCTTCACTTATTAGGTCAAAAACCTCATATATCACTAGCCAATCTTGCAAAA
ATCTATGGTCCAATTATGAGTTTAAAACTTGGCCAAATTACTACAGTTGTCATTTCTTCT
TCAACCATGGCAAAACAAGTCCTTAAAAATCAAGATCAAGCATTTTCAACTAGATTTATT
CCTAATGCCCTGCAAGCTCATAACCATTACAAATTTTCTGTAGCATGGCTTCCTGTTTGT
CCTCAATGGCGAACGCTTCGACGAATCTTGAACACCAACCTCCTCTCTTCCAATAGGCTT
GATGCAAATCAACATTTAAGATCTCAAAAGGTGAAAGAATTGCTTGCTTATTGTGCAAAT
TGTAGTCAAGAAGGTGAAGTTGTGGATATAGGTCAAGTTGCTTTCAAGACTAATCTCAAT
TTGGTGTCCAACACCCTTTTCTCTAAGGACTTGGCTGACCCCTTTTCGGATTCAAAGGTT
GAGCTGAAGGATGCGATTTGGGGCATTATGGCTGAGGTTGGGAAGCCTAACCTAGTAGAT
TTTTTCCCTTTACTCGAAAAAATTGATCCTCAAGGGATAAGGCGTCGTGCAACATTTCAT
TTTGGTAAGTTGATGAAACTTTTTGATGGTTTGATCAACGAGCGATTGGAGGAAAAGAAT
AGATTTAGTAGCGCAAAGAGTGATGTTTTGGAAGTTTTCCTCAATATCAGCAAAGAAAAC
CCTGAAGAGATCAATCATAATCACATCAAGTCCATGTTCCTGGACCTATTTGGCGCGGGG
ACTGATACAACTACAAGCACAATAGAATGGGCAATGGCAGAAATAATTAGACAACCAGAG
ATAATGAGAAAAGCACAAGCTGAGCTTGCACAAGTCATTGGAAAAGGAAAAATAGTAGAA
GAAGCTGATGTTGCCCAACTTCCTTACTTGCAATGCATTATCAAAGAAACATTAAGAATG
CATCCACCCGTTCCGTTCTTACTCCCGCGTAAAGTGGAGCAGGATGTTGAAATGTGTGAC
TATATTATCCCGAAAGGGTCACAGGTACTAGTCAATGCATGGGCAATTGGTCGAGATTCT
AGTTCTTGGGAGGATCCTTTAGTATTTAAACCTGAGAGGTTTTGGAGTTCGGATGTGGAT
ATGAGAGGGCAAGATTTTGAATTGATTCCATTTGGTGCTGGTAGAAGAATATGCCCCGGC
GTGTCACTGGCATTAAGAATGCTTCCGGTAATGTTGGGCTCGCTATTACATTCCTTCAAT
TGGAAGCTTGAGGCAGTAATTGCACCAAAAGACTTAGATATGGAGGAGAAGTTTGGTATC
ACCTTAGCGAAAGCCCATCCTTTGCGAGCTATCCCATCCCCGATTTAG

Peptide Sequence

PEP ID

XP_016438735.1
PEP Infomation

PREDICTED: geraniol 8-hydroxylase-like [Nicotiana tabacum]
Sequence

MDYYTLVFGSIFALSFLYILAKIRRKGTKKLPPGPKPWPIIGNLHLLGQKPHISLANLAK
IYGPIMSLKLGQITTVVISSSTMAKQVLKNQDQAFSTRFIPNALQAHNHYKFSVAWLPVC
PQWRTLRRILNTNLLSSNRLDANQHLRSQKVKELLAYCANCSQEGEVVDIGQVAFKTNLN
LVSNTLFSKDLADPFSDSKVELKDAIWGIMAEVGKPNLVDFFPLLEKIDPQGIRRRATFH
FGKLMKLFDGLINERLEEKNRFSSAKSDVLEVFLNISKENPEEINHNHIKSMFLDLFGAG
TDTTTSTIEWAMAEIIRQPEIMRKAQAELAQVIGKGKIVEEADVAQLPYLQCIIKETLRM
HPPVPFLLPRKVEQDVEMCDYIIPKGSQVLVNAWAIGRDSSSWEDPLVFKPERFWSSDVD
MRGQDFELIPFGAGRRICPGVSLALRMLPVMLGSLLHSFNWKLEAVIAPKDLDMEEKFGI
TLAKAHPLRAIPSPI

Transcript Sequence

Gene sequence data has not been registered.